TASK OBJECTIVE
matplotlib/matplotlib
How do you make Matplotlib ax.bar render all-NaN input without _safe_first_finite raising StopIteration?
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TASK STATEMENT
verbatim agent-facing issue statement
[Bug]: ax.bar raises for all-nan data on matplotlib 3.6.1
### Bug summary
`ax.bar` raises an exception in 3.6.1 when passed only nan data. This irrevocably breaks seaborn's histogram function (which draws and then removes a "phantom" bar to trip the color cycle).
### Code for reproduction
```python
import numpy as np
import matplotlib.pyplot as plt
f, ax = plt.subplots()
ax.bar([np.nan], [np.nan])
```
### Actual outcome
```python-traceback
---------------------------------------------------------------------------
StopIteration Traceback (most recent call last)
Cell In [1], line 4
2 import matplotlib.pyplot as plt
3 f, ax = plt.subplots()
----> 4 ax.bar([np.nan], [np.nan])[0].get_x()
File ~/miniconda/envs/py310/lib/python3.10/site-packages/matplotlib/__init__.py:1423, in _preprocess_data.<locals>.inner(ax, data, *args, **kwargs)
1420 @functools.wraps(func)
1421 def inner(ax, *args, data=None, **kwargs):
1422 if data is None:
-> 1423 return func(ax, *map(sanitize_sequence, args), **kwargs)
1425 bound = new_sig.bind(ax, *args, **kwargs)
1426 auto_label = (bound.arguments.get(label_namer)
1427 or bound.kwargs.get(label_namer))
File ~/miniconda/envs/py310/lib/python3.10/site-packages/matplotlib/axes/_axes.py:2373, in Axes.bar(self, x, height, width, bottom, align, **kwargs)
2371 x0 = x
2372 x = np.asarray(self.convert_xunits(x))
-> 2373 width = self._convert_dx(width, x0, x, self.convert_xunits)
2374 if xerr is not None:
2375 xerr = self._convert_dx(xerr, x0, x, self.convert_xunits)
File ~/miniconda/envs/py310/lib/python3.10/site-packages/matplotlib/axes/_axes.py:2182, in Axes._convert_dx(dx, x0, xconv, convert)
2170 try:
2171 # attempt to add the width to x0; this works for
2172 # datetime+timedelta, for instance
(...)
2179 # removes the units from unit packages like `pint` that
2180 # wrap numpy arrays.
2181 try:
-> 2182 x0 = cbook._safe_first_finite(x0)
2183 except (TypeError, IndexError, KeyError):
2184 pass
File ~/miniconda/envs/py310/lib/python3.10/site-packages/matplotlib/cbook/__init__.py:1749, in _safe_first_finite(obj, skip_nonfinite)
1746 raise RuntimeError("matplotlib does not "
1747 "support generators as input")
1748 else:
-> 1749 return next(val for val in obj if safe_isfinite(val))
StopIteration:
```
### Expected outcome
On 3.6.0 this returns a `BarCollection` with one Rectangle, having `nan` for `x` and `height`.
### Additional information
I assume it's related to this bullet in the release notes:
- Fix barplot being empty when first element is NaN
But I don't know the context for it to investigate further (could these link to PRs?)
Further debugging:
```python
ax.bar([np.nan], [0]) # Raises
ax.bar([0], [np.nan]) # Works
```
So it's about the x position specifically.
### Operating system
Macos
### Matplotlib Version
3.6.1
### Matplotlib Backend
_No response_
### Python version
_No response_
### Jupyter version
_No response_
### Installation
pipMatch evidence
Primary terms
StopIteration_safe_first_finitematplotlib/cbook/__init__.pymatplotlib/matplotlibnext(val for val in obj if safe_isfinite(val))safe_isfiniteAxes.barAxes._convert_dxconvert_xunits_preprocess_datasanitize_sequenceBarCollectionTechnical objective
Restore Matplotlib's ability to draw a bar from all-NaN input without raising.
Success condition
ax.bar([np.nan], [np.nan]) returns a bar container holding one Rectangle with NaN x and NaN height (the 3.6.0 behaviour the reporter describes), and ax.bar([np.nan], [0]) no longer raises StopIteration. The earlier fix this regression came from — "Fix barplot being empty when first element is NaN" — must remain effective, i.e. a leading NaN followed by finite values must still produce a correctly positioned bar.
Search fingerprints
- Error signature: StopIteration
- Traceback path: matplotlib/cbook/__init__.py
- Repository: matplotlib/matplotlib
- Repro: ax.bar([np.nan], [np.nan]), ax.bar([np.nan], [0]), ax.bar([0], [np.nan])
- Error: StopIteration raised from next(val for val in obj if safe_isfinite(val))
- Symbols: _safe_first_finite, safe_isfinite, Axes.bar, Axes._convert_dx, convert_xunits, _preprocess_data, sanitize_sequence, BarCollection
- Files: matplotlib/cbook/__init__.py, matplotlib/axes/_axes.py, matplotlib/__init__.py
- Release-note phrase: Fix barplot being empty when first element is NaN
- Versions named: matplotlib 3.6.1 (broken) vs 3.6.0 (working)
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